Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
SARC rs35629363 chr7:134020128 A/G 2.46E-5 252 32.35 31.27 22.03 KM Plot
SARC rs35720014 chr3:52982110 A/C 2.34E-14 253 30.93 35.37 1.17 KM Plot
SARC rs35737577 chr3:53002557 G/C 1.81E-14 257 30.93 35.37 1.17 KM Plot
SARC rs35750877 chr3:53099587 A/G 0 253 31.93 27.1 2.13 KM Plot
SARC rs35754050 chr7:134024757 C/G 9.77E-5 254 32.4 30.93 21 KM Plot
SARC rs35761380 chr3:38876049 T/A 9.41E-5 246 32.35 35.27 17.03 KM Plot
SARC rs35819335 chr11:64851453 CT/C 4.51E-8 257 5.47 23.13 32.5 KM Plot
SARC rs35849389 chr3:53005235 A/G 1.93E-14 256 30.85 35.37 1.17 KM Plot
SARC rs35861311 chr16:1491427 C/T 0 246 30.32 32.4 0.73 KM Plot
SARC rs35871059 chr3:42701694 G/A 7.92E-6 248 32.13 34.08 13.08 KM Plot
SARC rs35956274 chr16:1492307 A/G 0 246 29.88 33.9 0.73 KM Plot
SARC rs36073481 chr11:55468837 AC/A 5.22E-8 250 35.67 26.15 13.4 KM Plot
SARC rs36090694 chr3:53010742 T/C 1.88E-14 256 30.77 36.73 1.17 KM Plot
SARC rs36124511 chr17:45513089 C/CAT 9.98E-5 257 19.97 34 32.4 KM Plot
SARC rs371792252 chr16:4648370 AAAG/A 6.27E-5 252 18.33 37.42 30.77 KM Plot